Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NINLQ9Y2I6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 AC079328.2-201ENST00000561241 3354 ntBASIC20.9■□□□□ 0.94
NINLQ9Y2I6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.9■□□□□ 0.94
NINLQ9Y2I6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 AC092850.2-201ENST00000623821 2697 ntBASIC20.9■□□□□ 0.94
NINLQ9Y2I6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NINLQ9Y2I6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NINLQ9Y2I6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.89■□□□□ 0.94
NINLQ9Y2I6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NINLQ9Y2I6 AC015818.8-201ENST00000587907 1519 ntBASIC20.89■□□□□ 0.94
NINLQ9Y2I6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
NINLQ9Y2I6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NINLQ9Y2I6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 HSPB1P2-201ENST00000448722 546 ntBASIC20.89■□□□□ 0.93
NINLQ9Y2I6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 ACR-203ENST00000529621 708 ntTSL 5 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 CLUHP2-201ENST00000426660 1303 ntBASIC20.89■□□□□ 0.93
NINLQ9Y2I6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
NINLQ9Y2I6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AL136309.1-201ENST00000403917 691 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AC006033.1-201ENST00000440505 426 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 HOMER2P2-201ENST00000451621 847 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms