Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 SNX29P1-201ENST00000548357 1007 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AP005482.1-201ENST00000563722 1273 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AL354718.3-201ENST00000616414 581 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 MIR6775-201ENST00000617557 69 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 CR382287.1-201ENST00000623954 586 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 AC148477.4-201ENST00000613430 1793 ntBASIC16.27■□□□□ 0.2
CDH9Q9ULB4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CDH9Q9ULB4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH9Q9ULB4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDH9Q9ULB4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDH9Q9ULB4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CDH9Q9ULB4 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CDH9Q9ULB4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 AC112693.3-201ENST00000624819 1983 ntBASIC16.26■□□□□ 0.19
CDH9Q9ULB4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 KLF2P4-201ENST00000451959 1225 ntBASIC16.26■□□□□ 0.19
CDH9Q9ULB4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 AC025279.2-201ENST00000569730 653 ntBASIC16.26■□□□□ 0.19
CDH9Q9ULB4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 AC011270.2-201ENST00000624293 2550 ntBASIC16.26■□□□□ 0.19
CDH9Q9ULB4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CDH9Q9ULB4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.25■□□□□ 0.19
CDH9Q9ULB4 ANKRD19P-201ENST00000338192 862 ntBASIC16.25■□□□□ 0.19
CDH9Q9ULB4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 RPL7P3-201ENST00000441388 714 ntBASIC16.25■□□□□ 0.19
CDH9Q9ULB4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 CTBP2P5-201ENST00000454986 1264 ntBASIC16.25■□□□□ 0.19
CDH9Q9ULB4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH9Q9ULB4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms