Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC009093.2-202ENST00000620513 2079 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 HLA-K-203ENST00000430151 1046 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 VDAC1P1-201ENST00000439229 848 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 DUX4L47-201ENST00000566374 394 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 AC051619.9-201ENST00000623237 597 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 INE2-201ENST00000630399 1874 ntBASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXXC1Q9P0U4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 OR2K2-202ENST00000374428 1038 ntBASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 RN7SKP175-201ENST00000408472 289 ntBASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 HLA-J-204ENST00000495278 958 ntBASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AC026434.2-201ENST00000506094 1078 ntBASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 DUX4L46-201ENST00000566845 751 ntBASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 AC002472.3-201ENST00000640124 621 ntBASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXXC1Q9P0U4 SHC1P1-201ENST00000425230 1745 ntBASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXXC1Q9P0U4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 KLF2P1-201ENST00000447438 1042 ntBASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AC138894.2-201ENST00000602838 371 ntBASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AC103810.10-201ENST00000606504 343 ntBASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 AC242376.2-201ENST00000619355 883 ntBASIC16.33■□□□□ 0.2
CXXC1Q9P0U4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms