Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 FGD5P1-202ENST00000614866 2498 ntBASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.93□□□□□ -0.34
LIN7CQ9NUP9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 RPL5P21-201ENST00000404620 815 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 METTL21AP1-201ENST00000438852 635 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC092183.1-201ENST00000469884 875 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC018529.1-201ENST00000613063 361 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 MIR6080-201ENST00000617359 66 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC232323.1-201ENST00000540724 2099 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 REXO1L5P-201ENST00000622260 2098 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 ZBED1P1-201ENST00000502364 1930 ntBASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.92□□□□□ -0.34
LIN7CQ9NUP9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.91□□□□□ -0.34
LIN7CQ9NUP9 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms