Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 EGLN3-205ENST00000547327 2849 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 AL135905.2-201ENST00000584934 1404 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 PCDHA6-201ENST00000378126 3267 ntBASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA1C-207ENST00000399597 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA1C-208ENST00000399601 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA1C-217ENST00000399641 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA1C-218ENST00000399644 6511 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC7.75□□□□□ -1.17
CDC42SE1Q9NRR8 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 WFS1-202ENST00000503569 3255 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 NHSL2-202ENST00000510661 3082 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ID1-201ENST00000376105 1233 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 HES6-204ENST00000409182 863 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 SLC47A1P1-202ENST00000449666 945 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC010141.2-201ENST00000452426 721 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC024563.2-201ENST00000603282 481 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC124016.1-201ENST00000609552 612 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 SETDB2-203ENST00000354234 6139 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 MED24-201ENST00000356271 3446 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AL590440.2-201ENST00000641973 1595 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 AC073862.5-201ENST00000624129 2027 ntBASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
CDC42SE1Q9NRR8 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms