Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.02■□□□□ 0.15
FOXP3Q9BZS1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 AL607033.1-201ENST00000623900 1599 ntBASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXP3Q9BZS1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 PCDHGB8P-201ENST00000502926 1973 ntBASIC16■□□□□ 0.15
FOXP3Q9BZS1 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 GHSR-202ENST00000427970 912 ntBASIC16■□□□□ 0.15
FOXP3Q9BZS1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 AC005912.2-201ENST00000619492 2400 ntBASIC16■□□□□ 0.15
FOXP3Q9BZS1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
FOXP3Q9BZS1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16■□□□□ 0.15
FOXP3Q9BZS1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 AC012645.4-201ENST00000610691 1061 ntBASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 AC003101.2-201ENST00000612557 442 ntBASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 REXO1L2P-201ENST00000425429 2069 ntBASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
FOXP3Q9BZS1 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms