Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 POU5F1P6-201ENST00000466990 990 ntBASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AC008738.7-201ENST00000609744 511 ntBASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 FGD5P1-202ENST00000614866 2498 ntBASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAF4Q9BUZ4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 GPAA1P2-202ENST00000606848 1787 ntBASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAF4Q9BUZ4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 AC136759.1-202ENST00000530858 2194 ntBASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 AL589702.1-201ENST00000641229 1509 ntBASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRAF4Q9BUZ4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms