Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC027601.4-201ENST00000611259 610 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 BX640515.1-201ENST00000617215 977 ntBASIC11.8□□□□□ -0.52
VGLL1Q99990 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.8□□□□□ -0.52
VGLL1Q99990 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.8□□□□□ -0.52
VGLL1Q99990 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
VGLL1Q99990 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
VGLL1Q99990 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
VGLL1Q99990 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 AZGP1P1-201ENST00000411909 902 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 ADH5P3-201ENST00000433842 1137 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.79□□□□□ -0.52
VGLL1Q99990 AC079140.1-201ENST00000508039 487 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 SLC25A1P1-201ENST00000528351 927 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.79□□□□□ -0.52
VGLL1Q99990 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.79□□□□□ -0.52
VGLL1Q99990 AL121894.2-201ENST00000602977 491 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 UXT-AS1-201ENST00000590504 1525 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 AP3S2-216ENST00000617003 1561 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
VGLL1Q99990 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 AC007191.1-201ENST00000623179 2995 ntBASIC11.79□□□□□ -0.52
VGLL1Q99990 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.79□□□□□ -0.52
VGLL1Q99990 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.79□□□□□ -0.52
VGLL1Q99990 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
VGLL1Q99990 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.78□□□□□ -0.52
VGLL1Q99990 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VGLL1Q99990 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.78□□□□□ -0.52
VGLL1Q99990 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms