Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC11.35□□□□□ -0.59
MUC4Q99102 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.35□□□□□ -0.59
MUC4Q99102 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.35□□□□□ -0.59
MUC4Q99102 HNRNPA1P40-201ENST00000426371 1278 ntBASIC11.35□□□□□ -0.59
MUC4Q99102 MTND6P24-201ENST00000440466 518 ntBASIC11.35□□□□□ -0.59
MUC4Q99102 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC11.35□□□□□ -0.59
MUC4Q99102 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.35□□□□□ -0.59
MUC4Q99102 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.35□□□□□ -0.59
MUC4Q99102 AC025678.2-201ENST00000562061 970 ntBASIC11.35□□□□□ -0.59
MUC4Q99102 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.35□□□□□ -0.59
MUC4Q99102 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.35□□□□□ -0.59
MUC4Q99102 AL133215.2-201ENST00000609242 977 ntBASIC11.35□□□□□ -0.59
MUC4Q99102 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
MUC4Q99102 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.35□□□□□ -0.59
MUC4Q99102 AC005912.2-201ENST00000619492 2400 ntBASIC11.35□□□□□ -0.59
MUC4Q99102 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.35□□□□□ -0.59
MUC4Q99102 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MUC4Q99102 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.35□□□□□ -0.59
MUC4Q99102 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 RBPMS2P1-201ENST00000437762 623 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 SLC25A39P2-201ENST00000537614 270 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.34□□□□□ -0.59
MUC4Q99102 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
MUC4Q99102 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
MUC4Q99102 AC026979.3-201ENST00000607315 403 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 AC007967.4-201ENST00000614700 386 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 AL358472.5-202ENST00000641448 1267 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 AP000845.1-201ENST00000581677 2131 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.34□□□□□ -0.59
MUC4Q99102 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.34□□□□□ -0.59
MUC4Q99102 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.34□□□□□ -0.59
MUC4Q99102 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MUC4Q99102 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.34□□□□□ -0.59
MUC4Q99102 LINC00628-201ENST00000628516 1289 ntBASIC11.34□□□□□ -0.59
MUC4Q99102 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC11.34□□□□□ -0.59
MUC4Q99102 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms