Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 ELK2AP-201ENST00000392510 1007 ntBASIC16.28■□□□□ 0.2
CASD1Q96PB1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 SPTLC1P5-201ENST00000450718 252 ntBASIC16.28■□□□□ 0.2
CASD1Q96PB1 UPF3AP2-201ENST00000457924 1132 ntBASIC16.28■□□□□ 0.2
CASD1Q96PB1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 AC079328.1-201ENST00000560358 952 ntBASIC16.28■□□□□ 0.2
CASD1Q96PB1 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.28■□□□□ 0.2
CASD1Q96PB1 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CASD1Q96PB1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 AL118508.1-201ENST00000613502 2345 ntBASIC16.27■□□□□ 0.2
CASD1Q96PB1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 DPM3-202ENST00000368399 517 ntBASIC16.27■□□□□ 0.2
CASD1Q96PB1 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 GHSR-202ENST00000427970 912 ntBASIC16.27■□□□□ 0.2
CASD1Q96PB1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 AC016629.1-201ENST00000596579 586 ntBASIC16.27■□□□□ 0.2
CASD1Q96PB1 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 AC097724.1-201ENST00000609581 426 ntBASIC16.27■□□□□ 0.2
CASD1Q96PB1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASD1Q96PB1 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CASD1Q96PB1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.27■□□□□ 0.19
CASD1Q96PB1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.27■□□□□ 0.19
CASD1Q96PB1 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASD1Q96PB1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 AC021723.1-201ENST00000486306 515 ntBASIC16.26■□□□□ 0.19
CASD1Q96PB1 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 AC005740.2-201ENST00000511085 419 ntBASIC16.26■□□□□ 0.19
CASD1Q96PB1 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.26■□□□□ 0.19
CASD1Q96PB1 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASD1Q96PB1 MIR4783-201ENST00000580343 82 ntBASIC16.26■□□□□ 0.19
CASD1Q96PB1 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms