Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 RN7SL769P-201ENST00000469386 295 ntBASIC18.9■□□□□ 0.62
NLRP3Q96P20 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NLRP3Q96P20 CHMP4BP1-201ENST00000556017 588 ntBASIC18.9■□□□□ 0.62
NLRP3Q96P20 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 AC016629.1-201ENST00000596579 586 ntBASIC18.9■□□□□ 0.62
NLRP3Q96P20 AC004466.1-201ENST00000599515 1080 ntBASIC18.9■□□□□ 0.62
NLRP3Q96P20 AL023803.2-201ENST00000620080 638 ntBASIC18.9■□□□□ 0.62
NLRP3Q96P20 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NLRP3Q96P20 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NLRP3Q96P20 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRP3Q96P20 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.9■□□□□ 0.62
NLRP3Q96P20 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NLRP3Q96P20 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NLRP3Q96P20 CYP2T1P-202ENST00000641596 2535 ntBASIC18.9■□□□□ 0.62
NLRP3Q96P20 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.89■□□□□ 0.61
NLRP3Q96P20 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 AL008707.1-201ENST00000422498 534 ntBASIC18.89■□□□□ 0.61
NLRP3Q96P20 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 AC021723.1-201ENST00000486306 515 ntBASIC18.89■□□□□ 0.61
NLRP3Q96P20 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NLRP3Q96P20 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.89■□□□□ 0.61
NLRP3Q96P20 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 AC005740.2-201ENST00000511085 419 ntBASIC18.88■□□□□ 0.61
NLRP3Q96P20 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 TUBBP5-203ENST00000508529 1334 ntBASIC18.88■□□□□ 0.61
NLRP3Q96P20 KRT8P29-201ENST00000420409 1371 ntBASIC18.88■□□□□ 0.61
NLRP3Q96P20 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NLRP3Q96P20 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NLRP3Q96P20 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.87■□□□□ 0.61
NLRP3Q96P20 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NLRP3Q96P20 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms