Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AL033527.5-201ENST00000641382 801 ntBASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC020658.6-201ENST00000623564 1870 ntBASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC104640.1-201ENST00000562617 2109 ntBASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AC084364.1-201ENST00000551967 1556 ntBASIC14.6□□□□□ -0.07
PTCHD1Q96NR3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 CU639417.3-201ENST00000624240 1404 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC090616.6-203ENST00000579186 1945 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 NME2P1-201ENST00000426182 414 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC005034.1-201ENST00000426657 489 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AL359711.2-201ENST00000563105 872 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 INTS4P2-202ENST00000614726 2019 ntBASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.59□□□□□ -0.07
PTCHD1Q96NR3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PTCHD1Q96NR3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTCHD1Q96NR3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms