Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 RNU1-114P-201ENST00000365297 166 ntBASIC20.59■□□□□ 0.89
CFAP53Q96M91 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 KRT43P-201ENST00000434019 910 ntBASIC20.59■□□□□ 0.89
CFAP53Q96M91 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 AL022328.1-201ENST00000610050 478 ntBASIC20.59■□□□□ 0.89
CFAP53Q96M91 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.59■□□□□ 0.89
CFAP53Q96M91 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CFAP53Q96M91 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.59■□□□□ 0.89
CFAP53Q96M91 AC018665.1-201ENST00000622927 1362 ntBASIC20.59■□□□□ 0.89
CFAP53Q96M91 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 KLF2P2-201ENST00000416807 1039 ntBASIC20.58■□□□□ 0.89
CFAP53Q96M91 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 GPR53P-205ENST00000457298 1084 ntBASIC20.58■□□□□ 0.89
CFAP53Q96M91 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CFAP53Q96M91 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.58■□□□□ 0.89
CFAP53Q96M91 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CFAP53Q96M91 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP53Q96M91 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CFAP53Q96M91 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP53Q96M91 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP53Q96M91 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP53Q96M91 HYMAI-201ENST00000635591 3347 ntBASIC20.58■□□□□ 0.88
CFAP53Q96M91 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CFAP53Q96M91 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CFAP53Q96M91 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CFAP53Q96M91 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 FLJ16779-201ENST00000612722 7638 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AL139094.1-201ENST00000405549 1188 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 BCRP2-202ENST00000447763 634 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 BCRP6-201ENST00000510112 632 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 BCRP7-201ENST00000511549 544 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 KRT17P8-201ENST00000540749 863 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.57■□□□□ 0.88
CFAP53Q96M91 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CFAP53Q96M91 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms