Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NBPF4Q96M43 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NBPF4Q96M43 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
NBPF4Q96M43 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NBPF4Q96M43 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NBPF4Q96M43 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NBPF4Q96M43 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 BNIP3P13-201ENST00000599968 566 ntBASIC20.08■□□□□ 0.81
NBPF4Q96M43 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
NBPF4Q96M43 AC091812.3-201ENST00000621362 345 ntBASIC20.08■□□□□ 0.81
NBPF4Q96M43 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NBPF4Q96M43 AC084018.2-201ENST00000613093 2607 ntBASIC20.08■□□□□ 0.8
NBPF4Q96M43 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NBPF4Q96M43 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NBPF4Q96M43 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.08■□□□□ 0.8
NBPF4Q96M43 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NBPF4Q96M43 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NBPF4Q96M43 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 PKD1P1-201ENST00000458669 6805 ntBASIC20.07■□□□□ 0.8
NBPF4Q96M43 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 RN7SKP175-201ENST00000408472 289 ntBASIC20.07■□□□□ 0.8
NBPF4Q96M43 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
NBPF4Q96M43 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NBPF4Q96M43 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 AP005117.1-202ENST00000581724 1908 ntBASIC20.06■□□□□ 0.8
NBPF4Q96M43 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 AL137783.1-201ENST00000623494 1896 ntBASIC20.06■□□□□ 0.8
NBPF4Q96M43 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
NBPF4Q96M43 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NBPF4Q96M43 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 AL118508.1-201ENST00000613502 2345 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 AC092850.2-201ENST00000623821 2697 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 MIR769-201ENST00000390225 118 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NBPF4Q96M43 ACTG1P2-201ENST00000415776 1125 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 ACTG1P11-201ENST00000425411 1125 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.05■□□□□ 0.8
NBPF4Q96M43 AC104073.2-201ENST00000453737 312 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 AC021723.1-201ENST00000486306 515 ntBASIC20.05■□□□□ 0.8
NBPF4Q96M43 AC005740.2-201ENST00000511085 419 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms