Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
AP3S1Q92572 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
AP3S1Q92572 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP3S1Q92572 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP3S1Q92572 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S1Q92572 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 AP001267.2-201ENST00000532619 2086 ntBASIC13.67□□□□□ -0.22
AP3S1Q92572 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S1Q92572 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
AP3S1Q92572 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S1Q92572 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.67□□□□□ -0.22
AP3S1Q92572 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 MTDHP3-201ENST00000594186 672 ntBASIC13.67□□□□□ -0.22
AP3S1Q92572 AC133561.5-201ENST00000635547 218 ntBASIC13.67□□□□□ -0.22
AP3S1Q92572 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.67□□□□□ -0.22
AP3S1Q92572 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.67□□□□□ -0.22
AP3S1Q92572 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
AP3S1Q92572 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.67□□□□□ -0.22
AP3S1Q92572 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
AP3S1Q92572 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 AC018529.2-202ENST00000611482 3087 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 CICP20-201ENST00000443330 2801 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 CICP8-201ENST00000455800 2813 ntBASIC13.66□□□□□ -0.22
AP3S1Q92572 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.66□□□□□ -0.22
AP3S1Q92572 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.66□□□□□ -0.22
AP3S1Q92572 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AP3S1Q92572 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms