Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
NUP35Q8NFH5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.62□□□□□ -0.55
NUP35Q8NFH5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AC018442.1-201ENST00000421439 2061 ntBASIC11.61□□□□□ -0.55
NUP35Q8NFH5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AC005562.1-201ENST00000583030 3219 ntBASIC11.61□□□□□ -0.55
NUP35Q8NFH5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AP000845.1-201ENST00000581677 2131 ntBASIC11.61□□□□□ -0.55
NUP35Q8NFH5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 AL450472.2-201ENST00000603663 1156 ntBASIC11.61□□□□□ -0.55
NUP35Q8NFH5 ACTL9-202ENST00000612068 1252 ntBASIC11.61□□□□□ -0.55
NUP35Q8NFH5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NUP35Q8NFH5 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AC005332.1-201ENST00000577698 1310 ntBASIC11.6□□□□□ -0.55
NUP35Q8NFH5 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AC105206.1-202ENST00000314927 2368 ntBASIC11.6□□□□□ -0.55
NUP35Q8NFH5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 SART3-203ENST00000546611 1184 ntBASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AL031432.2-201ENST00000566714 459 ntBASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AL928711.1-201ENST00000570165 459 ntBASIC11.6□□□□□ -0.55
NUP35Q8NFH5 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.6□□□□□ -0.55
NUP35Q8NFH5 AL078644.1-201ENST00000609881 752 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms