Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAM1L1Q8N609 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 KRT18P25-201ENST00000508931 1278 ntBASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC068587.3-201ENST00000526613 355 ntBASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 AC013268.4-201ENST00000637413 2228 ntBASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 MROH4P-201ENST00000431302 1578 ntBASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAM1L1Q8N609 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 REXO1L4P-201ENST00000605109 1937 ntBASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 BAATP1-201ENST00000412284 1225 ntBASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 AC012441.1-201ENST00000446669 685 ntBASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAM1L1Q8N609 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms