Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AC104457.1-201ENST00000401024 814 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 MPRIPP1-201ENST00000452433 1089 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AC022616.1-201ENST00000518688 554 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AC106820.3-201ENST00000561653 397 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 RN7SL713P-201ENST00000582127 302 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 AL645728.2-202ENST00000641679 227 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.04■□□□□ 0.64
SYNE4Q8N205 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.04■□□□□ 0.64
SYNE4Q8N205 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNE4Q8N205 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 NKAIN1P1-201ENST00000435754 582 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 RN7SL769P-201ENST00000469386 295 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 AC026434.2-201ENST00000506094 1078 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 AC100850.1-201ENST00000506768 649 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 MIR4722-201ENST00000578292 60 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 AC138627.1-207ENST00000641560 1006 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 INE2-201ENST00000630399 1874 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYNE4Q8N205 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.03■□□□□ 0.64
SYNE4Q8N205 KRT8P19-201ENST00000551916 1455 ntBASIC19.03■□□□□ 0.64
SYNE4Q8N205 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.02■□□□□ 0.64
SYNE4Q8N205 POM121L10P-201ENST00000436994 1285 ntBASIC19.02■□□□□ 0.64
SYNE4Q8N205 CHMP1AP1-201ENST00000445563 662 ntBASIC19.02■□□□□ 0.64
SYNE4Q8N205 HIST2H2BB-201ENST00000449108 381 ntBASIC19.02■□□□□ 0.64
SYNE4Q8N205 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYNE4Q8N205 AC126915.1-201ENST00000522847 1038 ntBASIC19.02■□□□□ 0.64
SYNE4Q8N205 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.02■□□□□ 0.64
SYNE4Q8N205 DUX4L47-201ENST00000566374 394 ntBASIC19.02■□□□□ 0.64
SYNE4Q8N205 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms