Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 MAGEA5-201ENST00000446757 942 ntBASIC15.86■□□□□ 0.13
SIX5Q8N196 FTLP10-202ENST00000505798 471 ntBASIC15.86■□□□□ 0.13
SIX5Q8N196 AC044849.1-201ENST00000519737 1188 ntBASIC15.86■□□□□ 0.13
SIX5Q8N196 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.86■□□□□ 0.13
SIX5Q8N196 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 AC007663.3-201ENST00000609632 465 ntBASIC15.86■□□□□ 0.13
SIX5Q8N196 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.86■□□□□ 0.13
SIX5Q8N196 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SIX5Q8N196 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SIX5Q8N196 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SIX5Q8N196 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
SIX5Q8N196 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 NKILA-202ENST00000614771 2598 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 AC005915.1-201ENST00000624912 2018 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SIX5Q8N196 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.85■□□□□ 0.13
SIX5Q8N196 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SIX5Q8N196 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 HLA-A-202ENST00000376806 1854 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SIX5Q8N196 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SIX5Q8N196 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 NKAIN1P1-201ENST00000435754 582 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 SPTLC1P5-201ENST00000450718 252 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.85■□□□□ 0.13
SIX5Q8N196 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.85■□□□□ 0.13
SIX5Q8N196 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.85■□□□□ 0.13
SIX5Q8N196 AC132872.1-201ENST00000566986 1195 ntBASIC15.85■□□□□ 0.13
SIX5Q8N196 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.85■□□□□ 0.13
SIX5Q8N196 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.85■□□□□ 0.13
SIX5Q8N196 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
SIX5Q8N196 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.85■□□□□ 0.13
SIX5Q8N196 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SIX5Q8N196 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SIX5Q8N196 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SIX5Q8N196 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.85■□□□□ 0.13
SIX5Q8N196 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SIX5Q8N196 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.84■□□□□ 0.13
SIX5Q8N196 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SIX5Q8N196 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.84■□□□□ 0.13
SIX5Q8N196 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
SIX5Q8N196 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SIX5Q8N196 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX5Q8N196 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms