Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C9orf40Q8IXQ3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AL359258.3-201ENST00000622910 2331 ntBASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 ACKR1-201ENST00000368121 1240 ntBASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AC012441.1-201ENST00000446669 685 ntBASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AC239800.4-201ENST00000603712 296 ntBASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AP005019.2-201ENST00000615104 511 ntBASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
C9orf40Q8IXQ3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.21□□□□□ -0.14
C9orf40Q8IXQ3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 AL645937.2-201ENST00000396808 931 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 BAATP1-201ENST00000412284 1225 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 NUS1P3-201ENST00000423502 862 ntBASIC14.2□□□□□ -0.14
C9orf40Q8IXQ3 U91328.1-201ENST00000437528 223 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms