Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AC022137.2-201ENST00000503482 481 ntBASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 MIR4259-201ENST00000584466 101 ntBASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 MIR6752-201ENST00000618442 71 ntBASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 AC126755.1-201ENST00000525846 6405 ntBASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.28■□□□□ 0.2
SCN4BQ8IWT1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 ANKRD19P-201ENST00000338192 862 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 AC092933.1-201ENST00000393644 945 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 KRT223P-202ENST00000449164 1292 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 KLF2P4-201ENST00000451959 1225 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 AC007551.1-201ENST00000457394 519 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 FTH1P14-201ENST00000482930 551 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 KRT18P25-201ENST00000508931 1278 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 AP005482.1-201ENST00000563722 1273 ntBASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SCN4BQ8IWT1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 TNRC18P3-201ENST00000441896 2691 ntBASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.27■□□□□ 0.19
SCN4BQ8IWT1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SCN4BQ8IWT1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms