Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 AC010336.2-201ENST00000564226 506 ntBASIC14.29□□□□□ -0.12
ZNF550Q7Z398 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 WASH3P-207ENST00000560956 1394 ntBASIC14.29□□□□□ -0.12
ZNF550Q7Z398 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
ZNF550Q7Z398 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 TOMM22P5-201ENST00000416399 439 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 KRT18P43-201ENST00000469825 1281 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC022144.1-201ENST00000602255 1580 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC239800.4-201ENST00000603712 296 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AF228730.6-201ENST00000641497 218 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC084121.3-201ENST00000641716 218 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 AC105233.6-201ENST00000642093 218 ntBASIC14.28□□□□□ -0.12
ZNF550Q7Z398 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF550Q7Z398 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 AC138969.3-201ENST00000546612 1459 ntBASIC14.27□□□□□ -0.12
ZNF550Q7Z398 AC138932.2-201ENST00000548268 1459 ntBASIC14.27□□□□□ -0.12
ZNF550Q7Z398 AC126755.4-201ENST00000549796 1459 ntBASIC14.27□□□□□ -0.12
ZNF550Q7Z398 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF550Q7Z398 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF550Q7Z398 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ZNF550Q7Z398 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF550Q7Z398 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.27□□□□□ -0.13
ZNF550Q7Z398 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms