Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 AC093724.1-201ENST00000448659 1027 ntBASIC10.34□□□□□ -0.75
SCXQ7RTU7 AC009477.1-201ENST00000452936 217 ntBASIC10.34□□□□□ -0.75
SCXQ7RTU7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 AL662799.1-202ENST00000614205 422 ntBASIC10.34□□□□□ -0.75
SCXQ7RTU7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
SCXQ7RTU7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
SCXQ7RTU7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL512652.2-201ENST00000625156 1716 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC015656.1-201ENST00000624209 3578 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CALY-202ENST00000368555 783 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SCXQ7RTU7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL080243.2-201ENST00000418783 582 ntBASIC10.33□□□□□ -0.76
SCXQ7RTU7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms