Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RFWD3Q6PCD5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.14■□□□□ 0.18
RFWD3Q6PCD5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.14■□□□□ 0.18
RFWD3Q6PCD5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RFWD3Q6PCD5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 KRT17P7-201ENST00000451704 1104 ntBASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 RN7SL837P-201ENST00000463010 287 ntBASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AC006486.2-201ENST00000624246 2199 ntBASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 AC104581.4-201ENST00000623126 3052 ntBASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RFWD3Q6PCD5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 BRI3BPP1-201ENST00000594224 787 ntBASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AL049840.4-201ENST00000602422 811 ntBASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AC009090.5-201ENST00000624886 2285 ntBASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.13■□□□□ 0.17
RFWD3Q6PCD5 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms