Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
KHDC1Q4VXA5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TSPY16P-201ENST00000449843 468 ntBASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 AC117489.1-201ENST00000625169 3217 ntBASIC15.71■□□□□ 0.11
KHDC1Q4VXA5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
KHDC1Q4VXA5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.71■□□□□ 0.1
KHDC1Q4VXA5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
KHDC1Q4VXA5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KHDC1Q4VXA5 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
KHDC1Q4VXA5 AL607033.1-201ENST00000623900 1599 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 AC136604.1-201ENST00000418535 575 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 FAM8A3P-201ENST00000427218 844 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 SERBP1P5-201ENST00000510079 1181 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 AC135586.1-201ENST00000539323 574 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 RN7SL204P-201ENST00000582831 262 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 LINC01115-203ENST00000606068 577 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 AC004461.2-201ENST00000629517 803 ntBASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
KHDC1Q4VXA5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms