Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EXT1Q16394 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.25□□□□□ -0.13
EXT1Q16394 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EXT1Q16394 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.25□□□□□ -0.13
EXT1Q16394 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
EXT1Q16394 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
EXT1Q16394 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
EXT1Q16394 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
EXT1Q16394 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
EXT1Q16394 ANKRD19P-201ENST00000338192 862 ntBASIC14.24□□□□□ -0.13
EXT1Q16394 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EXT1Q16394 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.24□□□□□ -0.13
EXT1Q16394 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.24□□□□□ -0.13
EXT1Q16394 GNRHR2-203ENST00000581100 1187 ntBASIC14.24□□□□□ -0.13
EXT1Q16394 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.24□□□□□ -0.13
EXT1Q16394 RHOXF1P1-202ENST00000635473 501 ntBASIC14.24□□□□□ -0.13
EXT1Q16394 AL603764.1-201ENST00000636452 321 ntBASIC14.24□□□□□ -0.13
EXT1Q16394 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EXT1Q16394 KRT8P14-201ENST00000414254 1442 ntBASIC14.24□□□□□ -0.13
EXT1Q16394 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.24□□□□□ -0.13
EXT1Q16394 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
EXT1Q16394 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 AL158070.2-201ENST00000623713 1621 ntBASIC14.23□□□□□ -0.13
EXT1Q16394 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
EXT1Q16394 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.23□□□□□ -0.13
EXT1Q16394 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.23□□□□□ -0.13
EXT1Q16394 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.23□□□□□ -0.13
EXT1Q16394 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
EXT1Q16394 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EXT1Q16394 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EXT1Q16394 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
EXT1Q16394 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EXT1Q16394 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EXT1Q16394 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EXT1Q16394 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.22□□□□□ -0.13
EXT1Q16394 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.22□□□□□ -0.13
EXT1Q16394 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
EXT1Q16394 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EXT1Q16394 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
EXT1Q16394 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms