Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.29■□□□□ 0.2
UBE3AQ05086 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
UBE3AQ05086 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 AL158070.2-201ENST00000623713 1621 ntBASIC16.29■□□□□ 0.2
UBE3AQ05086 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.29■□□□□ 0.2
UBE3AQ05086 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
UBE3AQ05086 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UBE3AQ05086 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 CYP46A4P-201ENST00000414953 267 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 POM121L8P-201ENST00000417732 1281 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE3AQ05086 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE3AQ05086 POM121L9P-203ENST00000441984 1285 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE3AQ05086 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE3AQ05086 AC245884.6-201ENST00000515672 1067 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 AC022616.1-201ENST00000518688 554 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 AC044849.1-201ENST00000519737 1188 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE3AQ05086 AL023803.2-201ENST00000620080 638 ntBASIC16.28■□□□□ 0.2
UBE3AQ05086 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.28■□□□□ 0.2
UBE3AQ05086 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.28■□□□□ 0.2
UBE3AQ05086 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.28■□□□□ 0.2
UBE3AQ05086 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UBE3AQ05086 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
UBE3AQ05086 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
UBE3AQ05086 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE3AQ05086 FLJ38576-201ENST00000623820 2459 ntBASIC16.27■□□□□ 0.2
UBE3AQ05086 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
UBE3AQ05086 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
UBE3AQ05086 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UBE3AQ05086 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE3AQ05086 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE3AQ05086 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.27■□□□□ 0.2
UBE3AQ05086 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UBE3AQ05086 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
UBE3AQ05086 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE3AQ05086 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE3AQ05086 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE3AQ05086 HINT2P1-201ENST00000419438 481 ntBASIC16.27■□□□□ 0.2
UBE3AQ05086 AL354877.1-201ENST00000424412 413 ntBASIC16.27■□□□□ 0.2
UBE3AQ05086 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 RN7SL720P-201ENST00000488178 304 ntBASIC16.27■□□□□ 0.2
UBE3AQ05086 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.27■□□□□ 0.2
UBE3AQ05086 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
UBE3AQ05086 OR10B1P-201ENST00000601666 907 ntBASIC16.27■□□□□ 0.2
UBE3AQ05086 AC073413.1-201ENST00000603927 732 ntBASIC16.27■□□□□ 0.2
UBE3AQ05086 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.27■□□□□ 0.2
UBE3AQ05086 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UBE3AQ05086 AP001505.2-201ENST00000616815 443 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms