Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VSX2P58304 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
VSX2P58304 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.84□□□□□ -0.03
VSX2P58304 KRT8P22-201ENST00000562317 1415 ntBASIC14.83□□□□□ -0.03
VSX2P58304 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.83□□□□□ -0.03
VSX2P58304 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VSX2P58304 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.83□□□□□ -0.03
VSX2P58304 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
VSX2P58304 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VSX2P58304 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VSX2P58304 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.83□□□□□ -0.04
VSX2P58304 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 AC084364.1-201ENST00000551967 1556 ntBASIC14.83□□□□□ -0.04
VSX2P58304 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
VSX2P58304 C1QBPP1-201ENST00000400117 770 ntBASIC14.83□□□□□ -0.04
VSX2P58304 AL512384.1-201ENST00000406683 331 ntBASIC14.83□□□□□ -0.04
VSX2P58304 SOCS2P1-201ENST00000417727 557 ntBASIC14.83□□□□□ -0.04
VSX2P58304 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.83□□□□□ -0.04
VSX2P58304 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 RN7SL837P-201ENST00000463010 287 ntBASIC14.83□□□□□ -0.04
VSX2P58304 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.83□□□□□ -0.04
VSX2P58304 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.83□□□□□ -0.04
VSX2P58304 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.83□□□□□ -0.04
VSX2P58304 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.83□□□□□ -0.04
VSX2P58304 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.83□□□□□ -0.04
VSX2P58304 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.83□□□□□ -0.04
VSX2P58304 AC239800.4-201ENST00000603712 296 ntBASIC14.83□□□□□ -0.04
VSX2P58304 AC025181.2-201ENST00000606994 802 ntBASIC14.83□□□□□ -0.04
VSX2P58304 CU634019.7-201ENST00000624153 1185 ntBASIC14.83□□□□□ -0.04
VSX2P58304 FP236241.2-201ENST00000624906 1185 ntBASIC14.83□□□□□ -0.04
VSX2P58304 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.83□□□□□ -0.04
VSX2P58304 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
VSX2P58304 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.83□□□□□ -0.04
VSX2P58304 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 AC104640.1-201ENST00000562617 2109 ntBASIC14.83□□□□□ -0.04
VSX2P58304 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VSX2P58304 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.83□□□□□ -0.04
VSX2P58304 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
VSX2P58304 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.82□□□□□ -0.04
VSX2P58304 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.82□□□□□ -0.04
VSX2P58304 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.82□□□□□ -0.04
VSX2P58304 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.82□□□□□ -0.04
VSX2P58304 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 IGHV3-72-202ENST00000621503 303 ntBASIC14.82□□□□□ -0.04
VSX2P58304 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.82□□□□□ -0.04
VSX2P58304 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
VSX2P58304 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 DRD5P1-201ENST00000456605 1438 ntBASIC14.82□□□□□ -0.04
VSX2P58304 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
VSX2P58304 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
VSX2P58304 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms