Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLDN20P56880 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 AC067930.6-201ENST00000623257 4947 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN20P56880 KRT18P64-201ENST00000434946 1219 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 RPL13P2-201ENST00000440687 659 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN20P56880 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN20P56880 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN20P56880 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN20P56880 TIMM17BP1-201ENST00000545713 516 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN20P56880 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 AC092337.1-201ENST00000568699 1129 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 MIR4313-201ENST00000580760 101 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 AL132655.2-201ENST00000596276 594 ntBASIC14.23□□□□□ -0.13
CLDN20P56880 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN20P56880 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
CLDN20P56880 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN20P56880 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN20P56880 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN20P56880 AC232323.1-201ENST00000540724 2099 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 REXO1L5P-201ENST00000622260 2098 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 AL137784.3-201ENST00000623858 2288 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CLDN20P56880 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN20P56880 AL035633.1-201ENST00000406139 838 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 PIN1P1-201ENST00000412108 996 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN20P56880 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN20P56880 AC190387.1-201ENST00000551683 408 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 AC023310.3-201ENST00000557027 670 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 AC100756.1-201ENST00000562736 682 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 AC138749.3-201ENST00000567691 622 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN20P56880 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN20P56880 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN20P56880 AC116165.1-201ENST00000611806 668 ntBASIC14.22□□□□□ -0.13
CLDN20P56880 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms