Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.52□□□□□ -0.25
CLDN12P56749 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN12P56749 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN12P56749 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN12P56749 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.52□□□□□ -0.25
CLDN12P56749 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CLDN12P56749 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CLDN12P56749 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 AL928921.2-201ENST00000641325 2442 ntBASIC13.51□□□□□ -0.25
CLDN12P56749 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.51□□□□□ -0.25
CLDN12P56749 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CLDN12P56749 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN12P56749 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN12P56749 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.51□□□□□ -0.25
CLDN12P56749 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.51□□□□□ -0.25
CLDN12P56749 AL773604.1-201ENST00000617417 272 ntBASIC13.51□□□□□ -0.25
CLDN12P56749 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.51□□□□□ -0.25
CLDN12P56749 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.51□□□□□ -0.25
CLDN12P56749 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLDN12P56749 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDN12P56749 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDN12P56749 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.5□□□□□ -0.25
CLDN12P56749 AC068137.2-201ENST00000605408 478 ntBASIC13.5□□□□□ -0.25
CLDN12P56749 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDN12P56749 REXO1L2P-201ENST00000425429 2069 ntBASIC13.5□□□□□ -0.25
CLDN12P56749 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms