Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LIMK2P53671 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.62■□□□□ 0.09
LIMK2P53671 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
LIMK2P53671 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LIMK2P53671 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.61■□□□□ 0.09
LIMK2P53671 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 AC007541.1-201ENST00000570282 1469 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.61■□□□□ 0.09
LIMK2P53671 AL353779.1-201ENST00000434793 351 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.61■□□□□ 0.09
LIMK2P53671 SERBP1P3-201ENST00000459980 809 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LIMK2P53671 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.61■□□□□ 0.09
LIMK2P53671 AC010336.2-201ENST00000564226 506 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.61■□□□□ 0.09
LIMK2P53671 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.61■□□□□ 0.09
LIMK2P53671 AL132655.2-201ENST00000596276 594 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.61■□□□□ 0.09
LIMK2P53671 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 AJ011931.1-201ENST00000618749 2492 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LIMK2P53671 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
LIMK2P53671 KRT8P12-202ENST00000472924 1397 ntBASIC15.61■□□□□ 0.09
LIMK2P53671 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.61■□□□□ 0.09
LIMK2P53671 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LIMK2P53671 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.6■□□□□ 0.09
LIMK2P53671 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 AL390755.1-201ENST00000623716 2027 ntBASIC15.6■□□□□ 0.09
LIMK2P53671 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LIMK2P53671 GK-202ENST00000378941 458 ntTSL 3 BASIC15.6■□□□□ 0.09
LIMK2P53671 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
LIMK2P53671 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
LIMK2P53671 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.6■□□□□ 0.09
LIMK2P53671 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 AL512361.1-201ENST00000554200 418 ntBASIC15.6■□□□□ 0.09
LIMK2P53671 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.6■□□□□ 0.09
LIMK2P53671 TP53TG3HP-202ENST00000569755 579 ntBASIC15.6■□□□□ 0.09
LIMK2P53671 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.6■□□□□ 0.09
LIMK2P53671 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.6■□□□□ 0.09
LIMK2P53671 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.6■□□□□ 0.09
LIMK2P53671 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LIMK2P53671 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.6■□□□□ 0.09
LIMK2P53671 WASH3P-207ENST00000560956 1394 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms