Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.82□□□□□ -0.2
SRP9P49458 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SRP9P49458 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SRP9P49458 AC107918.4-201ENST00000641966 3141 ntBASIC13.81□□□□□ -0.2
SRP9P49458 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 AC140479.7-201ENST00000636301 2332 ntBASIC13.81□□□□□ -0.2
SRP9P49458 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 MROH4P-201ENST00000431302 1578 ntBASIC13.81□□□□□ -0.2
SRP9P49458 AP3S2-216ENST00000617003 1561 ntBASIC13.81□□□□□ -0.2
SRP9P49458 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 AL353705.2-201ENST00000428243 662 ntBASIC13.81□□□□□ -0.2
SRP9P49458 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 AC245100.5-201ENST00000452108 331 ntBASIC13.81□□□□□ -0.2
SRP9P49458 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.81□□□□□ -0.2
SRP9P49458 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 MIR4321-201ENST00000592276 80 ntBASIC13.81□□□□□ -0.2
SRP9P49458 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.81□□□□□ -0.2
SRP9P49458 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.81□□□□□ -0.2
SRP9P49458 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 AP001059.3-201ENST00000619053 235 ntBASIC13.81□□□□□ -0.2
SRP9P49458 LINC00628-201ENST00000628516 1289 ntBASIC13.81□□□□□ -0.2
SRP9P49458 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.81□□□□□ -0.2
SRP9P49458 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.81□□□□□ -0.2
SRP9P49458 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 AC006504.5-208ENST00000588784 2401 ntBASIC13.81□□□□□ -0.2
SRP9P49458 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.81□□□□□ -0.2
SRP9P49458 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRP9P49458 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.81□□□□□ -0.2
SRP9P49458 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
SRP9P49458 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 FOXO1B-201ENST00000504678 1527 ntBASIC13.8□□□□□ -0.2
SRP9P49458 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.8□□□□□ -0.2
SRP9P49458 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.8□□□□□ -0.2
SRP9P49458 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.8□□□□□ -0.2
SRP9P49458 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRP9P49458 HLA-J-203ENST00000494367 1087 ntBASIC13.8□□□□□ -0.2
SRP9P49458 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.8□□□□□ -0.2
SRP9P49458 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms