Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.3□□□□□ -0.44
CDC34P49427 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CDC34P49427 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CDC34P49427 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
CDC34P49427 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CDC34P49427 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.29□□□□□ -0.44
CDC34P49427 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.29□□□□□ -0.44
CDC34P49427 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.29□□□□□ -0.44
CDC34P49427 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 RPL5P21-201ENST00000404620 815 ntBASIC12.29□□□□□ -0.44
CDC34P49427 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.29□□□□□ -0.44
CDC34P49427 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.29□□□□□ -0.44
CDC34P49427 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.29□□□□□ -0.44
CDC34P49427 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.29□□□□□ -0.44
CDC34P49427 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 AL009183.1-201ENST00000603760 355 ntBASIC12.29□□□□□ -0.44
CDC34P49427 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CDC34P49427 AL928921.2-201ENST00000641325 2442 ntBASIC12.29□□□□□ -0.44
CDC34P49427 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CDC34P49427 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CDC34P49427 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CDC34P49427 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.28□□□□□ -0.44
CDC34P49427 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 ATP5G2P1-201ENST00000433580 426 ntBASIC12.28□□□□□ -0.44
CDC34P49427 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 AC108073.2-201ENST00000464002 357 ntBASIC12.28□□□□□ -0.44
CDC34P49427 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.28□□□□□ -0.44
CDC34P49427 OR7E14P-202ENST00000530490 1290 ntBASIC12.28□□□□□ -0.44
CDC34P49427 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.28□□□□□ -0.44
CDC34P49427 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CDC34P49427 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CDC34P49427 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.28□□□□□ -0.44
CDC34P49427 AC004790.2-201ENST00000623588 572 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms