Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
SLC6A12P48065 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC6A12P48065 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC6A12P48065 AP002414.2-201ENST00000591780 3365 ntBASIC14.88□□□□□ -0.03
SLC6A12P48065 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.88□□□□□ -0.03
SLC6A12P48065 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.88□□□□□ -0.03
SLC6A12P48065 VDAC1P7-201ENST00000462417 847 ntBASIC14.88□□□□□ -0.03
SLC6A12P48065 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 SERBP1P5-201ENST00000510079 1181 ntBASIC14.88□□□□□ -0.03
SLC6A12P48065 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A12P48065 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A12P48065 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.88□□□□□ -0.03
SLC6A12P48065 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 AL360270.3-201ENST00000609118 1348 ntBASIC14.88□□□□□ -0.03
SLC6A12P48065 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SLC6A12P48065 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.88□□□□□ -0.03
SLC6A12P48065 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SLC6A12P48065 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.88□□□□□ -0.03
SLC6A12P48065 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SLC6A12P48065 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC6A12P48065 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC6A12P48065 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.87□□□□□ -0.03
SLC6A12P48065 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.87□□□□□ -0.03
SLC6A12P48065 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 MIR8072-201ENST00000614241 80 ntBASIC14.87□□□□□ -0.03
SLC6A12P48065 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
SLC6A12P48065 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SLC6A12P48065 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SLC6A12P48065 AL138799.1-201ENST00000448213 1675 ntBASIC14.87□□□□□ -0.03
SLC6A12P48065 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms