Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
NEDD4P46934 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 REXO1L2P-201ENST00000425429 2069 ntBASIC18.12■□□□□ 0.49
NEDD4P46934 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 AC006058.4-201ENST00000624016 1670 ntBASIC18.12■□□□□ 0.49
NEDD4P46934 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.12■□□□□ 0.49
NEDD4P46934 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.12■□□□□ 0.49
NEDD4P46934 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 CR383656.12-201ENST00000549567 513 ntBASIC18.12■□□□□ 0.49
NEDD4P46934 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.12■□□□□ 0.49
NEDD4P46934 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.12■□□□□ 0.49
NEDD4P46934 AP001063.1-201ENST00000568332 529 ntBASIC18.12■□□□□ 0.49
NEDD4P46934 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.12■□□□□ 0.49
NEDD4P46934 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
NEDD4P46934 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.12■□□□□ 0.49
NEDD4P46934 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NEDD4P46934 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NEDD4P46934 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NEDD4P46934 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEDD4P46934 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 ACTG1P3-201ENST00000431775 1114 ntBASIC18.11■□□□□ 0.49
NEDD4P46934 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.11■□□□□ 0.49
NEDD4P46934 AC022137.2-201ENST00000503482 481 ntBASIC18.11■□□□□ 0.49
NEDD4P46934 AC106760.1-201ENST00000508690 800 ntBASIC18.11■□□□□ 0.49
NEDD4P46934 AC068587.3-201ENST00000526613 355 ntBASIC18.11■□□□□ 0.49
NEDD4P46934 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.11■□□□□ 0.49
NEDD4P46934 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEDD4P46934 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.11■□□□□ 0.49
NEDD4P46934 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NEDD4P46934 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NEDD4P46934 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.11■□□□□ 0.49
NEDD4P46934 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NEDD4P46934 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.1■□□□□ 0.49
NEDD4P46934 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.1■□□□□ 0.49
NEDD4P46934 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC18.1■□□□□ 0.49
NEDD4P46934 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.1■□□□□ 0.49
NEDD4P46934 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.1■□□□□ 0.49
NEDD4P46934 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NEDD4P46934 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NEDD4P46934 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms