Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 AC136759.1-202ENST00000530858 2194 ntBASIC12.73□□□□□ -0.37
NKX2-1P43699 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.73□□□□□ -0.37
NKX2-1P43699 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.73□□□□□ -0.37
NKX2-1P43699 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 PHKG1P2-201ENST00000457537 863 ntBASIC12.73□□□□□ -0.37
NKX2-1P43699 AC098859.1-201ENST00000502915 1238 ntBASIC12.73□□□□□ -0.37
NKX2-1P43699 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.73□□□□□ -0.37
NKX2-1P43699 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.73□□□□□ -0.37
NKX2-1P43699 AC061975.2-201ENST00000581722 295 ntBASIC12.73□□□□□ -0.37
NKX2-1P43699 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NKX2-1P43699 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 REXO1L2P-201ENST00000425429 2069 ntBASIC12.73□□□□□ -0.37
NKX2-1P43699 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NKX2-1P43699 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.73□□□□□ -0.37
NKX2-1P43699 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NKX2-1P43699 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
NKX2-1P43699 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-1P43699 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-1P43699 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 RNPS1P1-201ENST00000507437 918 ntBASIC12.72□□□□□ -0.37
NKX2-1P43699 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.72□□□□□ -0.37
NKX2-1P43699 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 CD63-210ENST00000550776 870 ntTSL 5 BASIC12.72□□□□□ -0.37
NKX2-1P43699 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-1P43699 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.72□□□□□ -0.37
NKX2-1P43699 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NKX2-1P43699 AC131212.3-201ENST00000624087 4219 ntBASIC12.72□□□□□ -0.37
NKX2-1P43699 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NKX2-1P43699 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms