Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRNA3P32297 AL080243.2-201ENST00000418783 582 ntBASIC16.35■□□□□ 0.21
CHRNA3P32297 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRNA3P32297 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRNA3P32297 HNRNPUP1-201ENST00000554987 333 ntBASIC16.35■□□□□ 0.21
CHRNA3P32297 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.35■□□□□ 0.21
CHRNA3P32297 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA3P32297 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRNA3P32297 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CHRNA3P32297 AC087499.5-201ENST00000452760 1342 ntBASIC16.35■□□□□ 0.21
CHRNA3P32297 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHRNA3P32297 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.35■□□□□ 0.21
CHRNA3P32297 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.35■□□□□ 0.21
CHRNA3P32297 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.35■□□□□ 0.21
CHRNA3P32297 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHRNA3P32297 AC022144.1-201ENST00000602255 1580 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.34■□□□□ 0.21
CHRNA3P32297 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC236430.1-201ENST00000402231 743 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 RPL5P21-201ENST00000404620 815 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.34■□□□□ 0.21
CHRNA3P32297 MRPS18AP1-201ENST00000414458 589 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC002472.2-201ENST00000442739 958 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.34■□□□□ 0.21
CHRNA3P32297 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 RN7SL204P-201ENST00000582831 262 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 AC138761.1-201ENST00000584393 385 ntBASIC16.34■□□□□ 0.21
CHRNA3P32297 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.34■□□□□ 0.21
CHRNA3P32297 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CHRNA3P32297 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.34■□□□□ 0.21
CHRNA3P32297 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHRNA3P32297 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHRNA3P32297 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA3P32297 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.33■□□□□ 0.21
CHRNA3P32297 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CHRNA3P32297 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA3P32297 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA3P32297 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHRNA3P32297 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CHRNA3P32297 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CHRNA3P32297 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA3P32297 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA3P32297 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHRNA3P32297 MIR661-201ENST00000384842 89 ntBASIC16.33■□□□□ 0.2
CHRNA3P32297 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA3P32297 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.33■□□□□ 0.2
CHRNA3P32297 FAM207CP-201ENST00000443486 507 ntBASIC16.33■□□□□ 0.2
CHRNA3P32297 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA3P32297 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.33■□□□□ 0.2
CHRNA3P32297 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHRNA3P32297 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA3P32297 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.33■□□□□ 0.2
CHRNA3P32297 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms