Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
APCP25054 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APCP25054 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.61□□□□□ -0.39
APCP25054 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC12.61□□□□□ -0.39
APCP25054 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APCP25054 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.61□□□□□ -0.39
APCP25054 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.61□□□□□ -0.39
APCP25054 IGHEP1-201ENST00000521393 651 ntBASIC12.61□□□□□ -0.39
APCP25054 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APCP25054 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
APCP25054 MIR3188-201ENST00000583494 85 ntBASIC12.61□□□□□ -0.39
APCP25054 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.61□□□□□ -0.39
APCP25054 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.61□□□□□ -0.39
APCP25054 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 AC018629.1-201ENST00000623381 1736 ntBASIC12.6□□□□□ -0.39
APCP25054 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.6□□□□□ -0.39
APCP25054 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
APCP25054 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
APCP25054 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
APCP25054 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
APCP25054 CYP4F23P-201ENST00000593402 1579 ntBASIC12.6□□□□□ -0.39
APCP25054 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.6□□□□□ -0.39
APCP25054 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC12.6□□□□□ -0.39
APCP25054 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.6□□□□□ -0.39
APCP25054 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
APCP25054 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
APCP25054 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 FLJ38576-201ENST00000623820 2459 ntBASIC12.6□□□□□ -0.39
APCP25054 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APCP25054 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
APCP25054 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
APCP25054 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.6□□□□□ -0.39
APCP25054 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 AL157407.1-201ENST00000435784 904 ntBASIC12.6□□□□□ -0.39
APCP25054 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC12.6□□□□□ -0.39
APCP25054 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
APCP25054 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC12.6□□□□□ -0.39
APCP25054 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
APCP25054 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.6□□□□□ -0.39
APCP25054 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APCP25054 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
APCP25054 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.59□□□□□ -0.39
APCP25054 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
APCP25054 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC12.59□□□□□ -0.39
APCP25054 AC026434.2-201ENST00000506094 1078 ntBASIC12.59□□□□□ -0.39
APCP25054 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.59□□□□□ -0.39
APCP25054 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.59□□□□□ -0.39
APCP25054 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APCP25054 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.59□□□□□ -0.39
APCP25054 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
APCP25054 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
APCP25054 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.59□□□□□ -0.39
APCP25054 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
APCP25054 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
APCP25054 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.59□□□□□ -0.39
APCP25054 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
APCP25054 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.59□□□□□ -0.39
APCP25054 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.59□□□□□ -0.39
APCP25054 AL512306.1-201ENST00000432698 848 ntBASIC12.59□□□□□ -0.39
APCP25054 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.59□□□□□ -0.39
APCP25054 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.59□□□□□ -0.39
APCP25054 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC12.59□□□□□ -0.39
APCP25054 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.59□□□□□ -0.39
APCP25054 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
APCP25054 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms