Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
XPAP23025 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.62■□□□□ 0.09
XPAP23025 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
XPAP23025 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.62■□□□□ 0.09
XPAP23025 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.62■□□□□ 0.09
XPAP23025 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.62■□□□□ 0.09
XPAP23025 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
XPAP23025 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.62■□□□□ 0.09
XPAP23025 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.62■□□□□ 0.09
XPAP23025 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
XPAP23025 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.62■□□□□ 0.09
XPAP23025 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.61■□□□□ 0.09
XPAP23025 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 ENPP7P5-201ENST00000541031 1031 ntBASIC15.61■□□□□ 0.09
XPAP23025 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.61■□□□□ 0.09
XPAP23025 AC093813.1-201ENST00000605066 256 ntBASIC15.61■□□□□ 0.09
XPAP23025 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 IGHV3-72-202ENST00000621503 303 ntBASIC15.61■□□□□ 0.09
XPAP23025 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.61■□□□□ 0.09
XPAP23025 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.61■□□□□ 0.09
XPAP23025 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.61■□□□□ 0.09
XPAP23025 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
XPAP23025 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.6■□□□□ 0.09
XPAP23025 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
XPAP23025 AL139384.1-201ENST00000612143 3047 ntBASIC15.6■□□□□ 0.09
XPAP23025 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
XPAP23025 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.6■□□□□ 0.09
XPAP23025 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
XPAP23025 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
XPAP23025 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms