Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.68□□□□□ -0.06
NCK1P16333 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NCK1P16333 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NCK1P16333 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
NCK1P16333 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.68□□□□□ -0.06
NCK1P16333 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NCK1P16333 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NCK1P16333 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 AL928921.2-201ENST00000641325 2442 ntBASIC14.67□□□□□ -0.06
NCK1P16333 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NCK1P16333 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
NCK1P16333 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.67□□□□□ -0.06
NCK1P16333 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 RPL5P21-201ENST00000404620 815 ntBASIC14.67□□□□□ -0.06
NCK1P16333 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.67□□□□□ -0.06
NCK1P16333 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.67□□□□□ -0.06
NCK1P16333 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.67□□□□□ -0.06
NCK1P16333 AP001005.1-201ENST00000571755 1248 ntBASIC14.67□□□□□ -0.06
NCK1P16333 RN7SL510P-201ENST00000581311 263 ntBASIC14.67□□□□□ -0.06
NCK1P16333 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 AC104692.2-201ENST00000603054 253 ntBASIC14.67□□□□□ -0.06
NCK1P16333 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.67□□□□□ -0.06
NCK1P16333 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
NCK1P16333 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 AP001267.2-201ENST00000532619 2086 ntBASIC14.67□□□□□ -0.06
NCK1P16333 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NCK1P16333 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NCK1P16333 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 AC104109.2-201ENST00000602919 1418 ntBASIC14.66□□□□□ -0.06
NCK1P16333 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.66□□□□□ -0.06
NCK1P16333 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.66□□□□□ -0.06
NCK1P16333 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.66□□□□□ -0.06
NCK1P16333 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
NCK1P16333 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
NCK1P16333 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.66□□□□□ -0.06
NCK1P16333 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NCK1P16333 AC136604.1-201ENST00000418535 575 ntBASIC14.66□□□□□ -0.06
NCK1P16333 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.66□□□□□ -0.06
NCK1P16333 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.66□□□□□ -0.06
NCK1P16333 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.66□□□□□ -0.06
NCK1P16333 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.66□□□□□ -0.06
NCK1P16333 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.66□□□□□ -0.06
NCK1P16333 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms