Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.02■□□□□ 0.16
CD48P09326 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 AC007686.3-201ENST00000619017 3487 ntBASIC16.02■□□□□ 0.16
CD48P09326 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CD48P09326 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 FGD5P1-202ENST00000614866 2498 ntBASIC16.02■□□□□ 0.16
CD48P09326 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.02■□□□□ 0.16
CD48P09326 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.02■□□□□ 0.16
CD48P09326 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.02■□□□□ 0.16
CD48P09326 UGT1A2P-201ENST00000454886 866 ntBASIC16.02■□□□□ 0.16
CD48P09326 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.02■□□□□ 0.16
CD48P09326 CYMP-203ENST00000474680 1263 ntBASIC16.02■□□□□ 0.16
CD48P09326 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.02■□□□□ 0.16
CD48P09326 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.02■□□□□ 0.16
CD48P09326 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.02■□□□□ 0.16
CD48P09326 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.02■□□□□ 0.16
CD48P09326 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CD48P09326 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CD48P09326 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.02■□□□□ 0.15
CD48P09326 AC013726.1-201ENST00000563747 2285 ntBASIC16.02■□□□□ 0.15
CD48P09326 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CD48P09326 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CD48P09326 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CD48P09326 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CD48P09326 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.01■□□□□ 0.15
CD48P09326 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.01■□□□□ 0.15
CD48P09326 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CD48P09326 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.01■□□□□ 0.15
CD48P09326 BASP1P1-201ENST00000430708 665 ntBASIC16.01■□□□□ 0.15
CD48P09326 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.01■□□□□ 0.15
CD48P09326 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 AL512638.1-201ENST00000457493 794 ntBASIC16.01■□□□□ 0.15
CD48P09326 AC023310.3-201ENST00000557027 670 ntBASIC16.01■□□□□ 0.15
CD48P09326 AC100756.1-201ENST00000562736 682 ntBASIC16.01■□□□□ 0.15
CD48P09326 AC138749.3-201ENST00000567691 622 ntBASIC16.01■□□□□ 0.15
CD48P09326 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.01■□□□□ 0.15
CD48P09326 AC116165.1-201ENST00000611806 668 ntBASIC16.01■□□□□ 0.15
CD48P09326 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.01■□□□□ 0.15
CD48P09326 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.01■□□□□ 0.15
CD48P09326 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.01■□□□□ 0.15
CD48P09326 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CD48P09326 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.01■□□□□ 0.15
CD48P09326 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CD48P09326 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CD48P09326 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD48P09326 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16■□□□□ 0.15
CD48P09326 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16■□□□□ 0.15
CD48P09326 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16■□□□□ 0.15
CD48P09326 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16■□□□□ 0.15
CD48P09326 NORAD-201ENST00000565493 5339 ntBASIC16■□□□□ 0.15
CD48P09326 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
CD48P09326 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CD48P09326 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms