Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MMP2P08253 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 SOCS2P1-201ENST00000417727 557 ntBASIC15.5■□□□□ 0.07
MMP2P08253 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 CLUHP6-201ENST00000580789 941 ntBASIC15.5■□□□□ 0.07
MMP2P08253 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.5■□□□□ 0.07
MMP2P08253 AC025048.6-201ENST00000634326 1161 ntBASIC15.5■□□□□ 0.07
MMP2P08253 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.5■□□□□ 0.07
MMP2P08253 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.5■□□□□ 0.07
MMP2P08253 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MMP2P08253 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 AJ011931.1-201ENST00000618749 2492 ntBASIC15.49■□□□□ 0.07
MMP2P08253 REXO1L5P-201ENST00000622260 2098 ntBASIC15.49■□□□□ 0.07
MMP2P08253 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
MMP2P08253 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
MMP2P08253 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.49■□□□□ 0.07
MMP2P08253 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.49■□□□□ 0.07
MMP2P08253 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
MMP2P08253 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.49■□□□□ 0.07
MMP2P08253 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.49■□□□□ 0.07
MMP2P08253 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MMP2P08253 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms