Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DQB2P05538 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.66■□□□□ 0.1
HLA-DQB2P05538 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 WASH3P-207ENST00000560956 1394 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC087499.6-201ENST00000411576 835 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MYCLP2-201ENST00000449268 967 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 RPL13AP25-201ENST00000484130 612 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 ELK1P1-201ENST00000485699 580 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC092552.1-201ENST00000547243 906 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC008494.3-201ENST00000606615 944 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AC103702.1-201ENST00000548801 2630 ntBASIC15.65■□□□□ 0.1
HLA-DQB2P05538 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DQB2P05538 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 REXO1L2P-201ENST00000425429 2069 ntBASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AL442647.2-201ENST00000429864 857 ntBASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC120045.2-201ENST00000567334 178 ntBASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC124283.3-201ENST00000570869 594 ntBASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC140912.1-201ENST00000577171 1054 ntBASIC15.64■□□□□ 0.09
HLA-DQB2P05538 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HLA-DQB2P05538 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms