Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CD4P01730 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.97■□□□□ 0.31
CD4P01730 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.97■□□□□ 0.31
CD4P01730 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.97■□□□□ 0.31
CD4P01730 AC138649.2-201ENST00000615886 705 ntBASIC16.97■□□□□ 0.31
CD4P01730 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CD4P01730 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CD4P01730 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.96■□□□□ 0.31
CD4P01730 AC091046.1-201ENST00000331871 207 ntBASIC16.96■□□□□ 0.31
CD4P01730 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.96■□□□□ 0.31
CD4P01730 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CD4P01730 FAM8A4P-201ENST00000435433 1213 ntBASIC16.96■□□□□ 0.31
CD4P01730 COX5BP1-201ENST00000507622 393 ntBASIC16.96■□□□□ 0.31
CD4P01730 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.96■□□□□ 0.31
CD4P01730 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.96■□□□□ 0.31
CD4P01730 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CD4P01730 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CD4P01730 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CD4P01730 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CD4P01730 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.95■□□□□ 0.3
CD4P01730 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD4P01730 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 AL139094.1-201ENST00000405549 1188 ntBASIC16.95■□□□□ 0.3
CD4P01730 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CD4P01730 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.95■□□□□ 0.3
CD4P01730 SPTLC1P5-201ENST00000450718 252 ntBASIC16.95■□□□□ 0.3
CD4P01730 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.95■□□□□ 0.3
CD4P01730 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.95■□□□□ 0.3
CD4P01730 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.95■□□□□ 0.3
CD4P01730 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.95■□□□□ 0.3
CD4P01730 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.95■□□□□ 0.3
CD4P01730 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 AP001505.2-201ENST00000616815 443 ntBASIC16.95■□□□□ 0.3
CD4P01730 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.95■□□□□ 0.3
CD4P01730 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.95■□□□□ 0.3
CD4P01730 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CD4P01730 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms