Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.79□□□□□ -0.04
LCMT2O60294 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LCMT2O60294 AC134915.1-201ENST00000426461 574 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.79□□□□□ -0.04
LCMT2O60294 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.79□□□□□ -0.04
LCMT2O60294 AL359711.2-201ENST00000563105 872 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LCMT2O60294 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.79□□□□□ -0.04
LCMT2O60294 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LCMT2O60294 AC107373.2-201ENST00000607735 490 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.79□□□□□ -0.04
LCMT2O60294 AC023157.3-201ENST00000619086 2088 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 AL645728.2-202ENST00000641679 227 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LCMT2O60294 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LCMT2O60294 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.79□□□□□ -0.04
LCMT2O60294 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.78□□□□□ -0.04
LCMT2O60294 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.78□□□□□ -0.04
LCMT2O60294 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LCMT2O60294 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
LCMT2O60294 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.78□□□□□ -0.04
LCMT2O60294 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 AL442647.2-201ENST00000429864 857 ntBASIC14.78□□□□□ -0.04
LCMT2O60294 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.78□□□□□ -0.04
LCMT2O60294 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.78□□□□□ -0.04
LCMT2O60294 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.78□□□□□ -0.04
LCMT2O60294 WFDC1-204ENST00000613603 549 ntBASIC14.78□□□□□ -0.04
LCMT2O60294 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.78□□□□□ -0.04
LCMT2O60294 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.78□□□□□ -0.04
LCMT2O60294 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LCMT2O60294 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LCMT2O60294 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LCMT2O60294 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LCMT2O60294 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.77□□□□□ -0.04
LCMT2O60294 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
LCMT2O60294 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.77□□□□□ -0.04
LCMT2O60294 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LCMT2O60294 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.77□□□□□ -0.04
LCMT2O60294 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LCMT2O60294 AL359258.3-201ENST00000622910 2331 ntBASIC14.77□□□□□ -0.04
LCMT2O60294 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LCMT2O60294 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LCMT2O60294 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
LCMT2O60294 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LCMT2O60294 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.77□□□□□ -0.04
LCMT2O60294 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LCMT2O60294 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LCMT2O60294 AC068587.6-202ENST00000641839 5619 ntBASIC14.77□□□□□ -0.04
LCMT2O60294 INTS4P2-202ENST00000614726 2019 ntBASIC14.77□□□□□ -0.04
LCMT2O60294 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LCMT2O60294 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.77□□□□□ -0.05
LCMT2O60294 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.77□□□□□ -0.05
LCMT2O60294 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LCMT2O60294 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.77□□□□□ -0.05
LCMT2O60294 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.77□□□□□ -0.05
LCMT2O60294 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.77□□□□□ -0.05
LCMT2O60294 AC120045.2-201ENST00000567334 178 ntBASIC14.77□□□□□ -0.05
LCMT2O60294 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.77□□□□□ -0.05
LCMT2O60294 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LCMT2O60294 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 AC025048.6-201ENST00000634326 1161 ntBASIC14.77□□□□□ -0.05
LCMT2O60294 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.77□□□□□ -0.05
LCMT2O60294 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.77□□□□□ -0.05
LCMT2O60294 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms