Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.73■□□□□ 0.27
EXTL3O43909 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 AC012508.2-201ENST00000567613 1472 ntBASIC16.73■□□□□ 0.27
EXTL3O43909 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
EXTL3O43909 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EXTL3O43909 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
EXTL3O43909 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
EXTL3O43909 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 AL645937.2-201ENST00000396808 931 ntBASIC16.72■□□□□ 0.27
EXTL3O43909 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
EXTL3O43909 AC011495.1-201ENST00000498085 584 ntBASIC16.72■□□□□ 0.27
EXTL3O43909 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
EXTL3O43909 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
EXTL3O43909 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
EXTL3O43909 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.72■□□□□ 0.27
EXTL3O43909 CLUHP6-201ENST00000580789 941 ntBASIC16.72■□□□□ 0.27
EXTL3O43909 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.72■□□□□ 0.27
EXTL3O43909 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 REXO1L4P-201ENST00000605109 1937 ntBASIC16.72■□□□□ 0.27
EXTL3O43909 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
EXTL3O43909 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
EXTL3O43909 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EXTL3O43909 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EXTL3O43909 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 NUS1P3-201ENST00000423502 862 ntBASIC16.71■□□□□ 0.27
EXTL3O43909 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
EXTL3O43909 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.71■□□□□ 0.27
EXTL3O43909 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
EXTL3O43909 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.71■□□□□ 0.27
EXTL3O43909 WASH3P-207ENST00000560956 1394 ntBASIC16.71■□□□□ 0.27
EXTL3O43909 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.71■□□□□ 0.27
EXTL3O43909 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
EXTL3O43909 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
EXTL3O43909 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms