Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC126177.1-201ENST00000547829 2218 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC148477.4-201ENST00000613430 1793 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AL645937.2-201ENST00000396808 931 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC007389.4-201ENST00000454674 793 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 MIR5189-201ENST00000577370 114 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 BX539320.1-201ENST00000623759 877 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 AC023024.2-201ENST00000623561 1993 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PRICKLE3O43900 MROH4P-201ENST00000431302 1578 ntBASIC14.81□□□□□ -0.04
PRICKLE3O43900 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.81□□□□□ -0.04
PRICKLE3O43900 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.8□□□□□ -0.04
PRICKLE3O43900 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AC138035.3-201ENST00000622706 2791 ntBASIC14.8□□□□□ -0.04
PRICKLE3O43900 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 NUS1P3-201ENST00000423502 862 ntBASIC14.8□□□□□ -0.04
PRICKLE3O43900 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AC022137.2-201ENST00000503482 481 ntBASIC14.8□□□□□ -0.04
PRICKLE3O43900 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AP001582.1-201ENST00000525856 295 ntBASIC14.8□□□□□ -0.04
PRICKLE3O43900 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms