Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CYTH3O43739 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.68■□□□□ 0.42
CYTH3O43739 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.68■□□□□ 0.42
CYTH3O43739 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.68■□□□□ 0.42
CYTH3O43739 GPR53P-205ENST00000457298 1084 ntBASIC17.68■□□□□ 0.42
CYTH3O43739 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.68■□□□□ 0.42
CYTH3O43739 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.68■□□□□ 0.42
CYTH3O43739 MIR4259-201ENST00000584466 101 ntBASIC17.68■□□□□ 0.42
CYTH3O43739 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CYTH3O43739 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.68■□□□□ 0.42
CYTH3O43739 MIR6775-201ENST00000617557 69 ntBASIC17.68■□□□□ 0.42
CYTH3O43739 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.68■□□□□ 0.42
CYTH3O43739 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CYTH3O43739 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CYTH3O43739 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.68■□□□□ 0.42
CYTH3O43739 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CYTH3O43739 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CYTH3O43739 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.67■□□□□ 0.42
CYTH3O43739 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.67■□□□□ 0.42
CYTH3O43739 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CYTH3O43739 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CYTH3O43739 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.67■□□□□ 0.42
CYTH3O43739 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.67■□□□□ 0.42
CYTH3O43739 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 AL355864.2-201ENST00000447420 863 ntBASIC17.67■□□□□ 0.42
CYTH3O43739 AC022210.1-201ENST00000449856 793 ntBASIC17.67■□□□□ 0.42
CYTH3O43739 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.67■□□□□ 0.42
CYTH3O43739 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.67■□□□□ 0.42
CYTH3O43739 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CYTH3O43739 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.67■□□□□ 0.42
CYTH3O43739 LINC00554-201ENST00000564841 3011 ntBASIC17.67■□□□□ 0.42
CYTH3O43739 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CYTH3O43739 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CYTH3O43739 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CYTH3O43739 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CYTH3O43739 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CYTH3O43739 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CYTH3O43739 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CYTH3O43739 KRT18P25-201ENST00000508931 1278 ntBASIC17.66■□□□□ 0.42
CYTH3O43739 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.66■□□□□ 0.42
CYTH3O43739 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 AC025279.2-201ENST00000569730 653 ntBASIC17.66■□□□□ 0.42
CYTH3O43739 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.66■□□□□ 0.42
CYTH3O43739 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.66■□□□□ 0.42
CYTH3O43739 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 AC012508.2-201ENST00000567613 1472 ntBASIC17.66■□□□□ 0.42
CYTH3O43739 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.66■□□□□ 0.42
CYTH3O43739 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CYTH3O43739 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms