Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MST1L-201ENST00000442552 2185 ntBASIC15.62■□□□□ 0.09
KDELR3O43731 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KDELR3O43731 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KDELR3O43731 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
KDELR3O43731 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
KDELR3O43731 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KDELR3O43731 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KDELR3O43731 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
KDELR3O43731 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.61■□□□□ 0.09
KDELR3O43731 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 AC006486.2-201ENST00000624246 2199 ntBASIC15.61■□□□□ 0.09
KDELR3O43731 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
KDELR3O43731 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.61■□□□□ 0.09
KDELR3O43731 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 AP001889.1-201ENST00000525414 633 ntBASIC15.61■□□□□ 0.09
KDELR3O43731 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.61■□□□□ 0.09
KDELR3O43731 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.61■□□□□ 0.09
KDELR3O43731 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
KDELR3O43731 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.61■□□□□ 0.09
KDELR3O43731 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.61■□□□□ 0.09
KDELR3O43731 BTNL10-201ENST00000595971 695 ntBASIC15.61■□□□□ 0.09
KDELR3O43731 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 AL360270.3-201ENST00000609118 1348 ntBASIC15.61■□□□□ 0.09
KDELR3O43731 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
KDELR3O43731 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.61■□□□□ 0.09
KDELR3O43731 WASH3P-207ENST00000560956 1394 ntBASIC15.61■□□□□ 0.09
KDELR3O43731 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.61■□□□□ 0.09
KDELR3O43731 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.6■□□□□ 0.09
KDELR3O43731 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
KDELR3O43731 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.6■□□□□ 0.09
KDELR3O43731 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.6■□□□□ 0.09
KDELR3O43731 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.6■□□□□ 0.09
KDELR3O43731 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 AC233724.13-201ENST00000598383 410 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms