Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC006033.1-201ENST00000440505 426 ntBASIC17.62■□□□□ 0.41
ATP2A1O14983 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.62■□□□□ 0.41
ATP2A1O14983 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A1O14983 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.62■□□□□ 0.41
ATP2A1O14983 SAMD11P1-201ENST00000571429 661 ntBASIC17.62■□□□□ 0.41
ATP2A1O14983 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2A1O14983 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.62■□□□□ 0.41
ATP2A1O14983 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ATP2A1O14983 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ATP2A1O14983 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A1O14983 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP2A1O14983 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP2A1O14983 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.61■□□□□ 0.41
ATP2A1O14983 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2A1O14983 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2A1O14983 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 PCDH8P1-201ENST00000428983 2773 ntBASIC17.61■□□□□ 0.41
ATP2A1O14983 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 AL591846.1-201ENST00000451736 433 ntBASIC17.61■□□□□ 0.41
ATP2A1O14983 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP2A1O14983 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.61■□□□□ 0.41
ATP2A1O14983 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ATP2A1O14983 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 ECM1P1-201ENST00000604092 1279 ntBASIC17.61■□□□□ 0.41
ATP2A1O14983 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 ENPP7P14-201ENST00000621765 1040 ntBASIC17.61■□□□□ 0.41
ATP2A1O14983 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2A1O14983 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.61■□□□□ 0.41
ATP2A1O14983 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP2A1O14983 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP2A1O14983 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ATP2A1O14983 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 TPM3P8-201ENST00000330554 643 ntBASIC17.6■□□□□ 0.41
ATP2A1O14983 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A1O14983 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 HOMER2P2-201ENST00000451621 847 ntBASIC17.6■□□□□ 0.41
ATP2A1O14983 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A1O14983 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A1O14983 EEF1DP1-201ENST00000585891 896 ntBASIC17.6■□□□□ 0.41
ATP2A1O14983 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A1O14983 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 LRRC59-203ENST00000576448 1531 ntBASIC17.6■□□□□ 0.41
ATP2A1O14983 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.6■□□□□ 0.41
ATP2A1O14983 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.6■□□□□ 0.41
ATP2A1O14983 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.6■□□□□ 0.41
ATP2A1O14983 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ATP2A1O14983 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms